From dd9a6ed1d2ab91172a3819c039067bf94d6702c8 Mon Sep 17 00:00:00 2001 From: Vladimir Mitev Date: Sun, 30 Aug 2026 00:05:47 +0300 Subject: [PATCH 1/2] Add Noodle biomedical literature MCP --- README.md | 1 + 1 file changed, 1 insertion(+) diff --git a/README.md b/README.md index 03049bb1e..18fc5932c 100644 --- a/README.md +++ b/README.md @@ -371,6 +371,7 @@ Design and visualize software architecture, system diagrams, and technical docum - [fulcradynamics/fulcra-context-mcp](https://github.com/fulcradynamics/fulcra-context-mcp) [![fulcra-context-mcp MCP server](https://glama.ai/mcp/servers/fulcradynamics/fulcra-context-mcp/badges/score.svg)](https://glama.ai/mcp/servers/fulcradynamics/fulcra-context-mcp) 🐍 ☁️ - MCP server for accessing personal health and biometric data including sleep stages, heart rate, HRV, glucose, workouts, calendar, and location via the Fulcra Life API with OAuth2 consent. - [genomoncology/biomcp](https://github.com/genomoncology/biomcp) 🐍 ☁️ - Biomedical research MCP server providing access to PubMed, ClinicalTrials.gov, and MyVariant.info. - [healthchainai/HealthChain](https://github.com/healthchainai/HealthChain) [![healthchainai/HealthChain MCP server](https://glama.ai/mcp/servers/healthchainai/HealthChain/badges/score.svg)](https://glama.ai/mcp/servers/healthchainai/HealthChain) 🐍 🏠 - Typed, validated FHIR tools for healthcare AI agents — build, read, validate, and code FHIR resources from a patient bundle, with terminology lookup and machine-readable validation reports built for fix-and-retry. `pip install healthchain[mcp]` +- [helena-bioinformatics/noodle-mcp](https://github.com/helena-bioinformatics/noodle-mcp) 🐍 ☁️ - Read-only biomedical literature discovery over a public PubMed-derived corpus: natural-language and PMID/DOI/PMCID search, source-linked publication records, and bounded citation or semantic graph traversal with provenance. Hosted Streamable HTTP endpoint; no account or API key required. - [HelixGenomics/Genomic-Agent-Discovery](https://github.com/HelixGenomics/Genomic-Agent-Discovery) [![Genomic-Agent-Discovery MCP server](https://glama.ai/mcp/servers/HelixGenomics/Genomic-Agent-Discovery/badges/score.svg)](https://glama.ai/mcp/servers/HelixGenomics/Genomic-Agent-Discovery) 📇 🏠 - Multi-agent MCP server for genomic analysis — specialized AI agents analyze raw DNA files across 16 databases (ClinVar, GWAS, gnomAD, CPIC, AlphaMissense, and more) and coordinate findings through shared MCP tools. Privacy-first, runs locally. - [hlydecker/ucsc-genome-mcp](https://github.com/hlydecker/ucsc-genome-mcp) 🐍 ☁️ - MCP server to interact with the UCSC Genome Browser API, letting you find genomes, chromosomes, and more. - [JamesANZ/medical-mcp](https://github.com/JamesANZ/medical-mcp) 📇 🏠 - An MCP server that provides access to medical information, drug databases, and healthcare resources. Enables AI assistants to query medical data, drug interactions, and clinical guidelines. From 3949675f67535dacb23eebc791d95e19a5394553 Mon Sep 17 00:00:00 2001 From: Vladimir Mitev Date: Mon, 31 Aug 2026 23:22:24 +0300 Subject: [PATCH 2/2] docs: add Noodle Glama score badge --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 18fc5932c..39f121f70 100644 --- a/README.md +++ b/README.md @@ -371,7 +371,7 @@ Design and visualize software architecture, system diagrams, and technical docum - [fulcradynamics/fulcra-context-mcp](https://github.com/fulcradynamics/fulcra-context-mcp) [![fulcra-context-mcp MCP server](https://glama.ai/mcp/servers/fulcradynamics/fulcra-context-mcp/badges/score.svg)](https://glama.ai/mcp/servers/fulcradynamics/fulcra-context-mcp) 🐍 ☁️ - MCP server for accessing personal health and biometric data including sleep stages, heart rate, HRV, glucose, workouts, calendar, and location via the Fulcra Life API with OAuth2 consent. - [genomoncology/biomcp](https://github.com/genomoncology/biomcp) 🐍 ☁️ - Biomedical research MCP server providing access to PubMed, ClinicalTrials.gov, and MyVariant.info. - [healthchainai/HealthChain](https://github.com/healthchainai/HealthChain) [![healthchainai/HealthChain MCP server](https://glama.ai/mcp/servers/healthchainai/HealthChain/badges/score.svg)](https://glama.ai/mcp/servers/healthchainai/HealthChain) 🐍 🏠 - Typed, validated FHIR tools for healthcare AI agents — build, read, validate, and code FHIR resources from a patient bundle, with terminology lookup and machine-readable validation reports built for fix-and-retry. `pip install healthchain[mcp]` -- [helena-bioinformatics/noodle-mcp](https://github.com/helena-bioinformatics/noodle-mcp) 🐍 ☁️ - Read-only biomedical literature discovery over a public PubMed-derived corpus: natural-language and PMID/DOI/PMCID search, source-linked publication records, and bounded citation or semantic graph traversal with provenance. Hosted Streamable HTTP endpoint; no account or API key required. +- [helena-bioinformatics/noodle-mcp](https://github.com/helena-bioinformatics/noodle-mcp) [![helena-bioinformatics/noodle-mcp MCP server](https://glama.ai/mcp/servers/helena-bioinformatics/noodle-mcp/badges/score.svg)](https://glama.ai/mcp/servers/helena-bioinformatics/noodle-mcp) 🐍 ☁️ - Read-only biomedical literature discovery over a public PubMed-derived corpus: natural-language and PMID/DOI/PMCID search, source-linked publication records, and bounded citation or semantic graph traversal with provenance. Hosted Streamable HTTP endpoint; no account or API key required. - [HelixGenomics/Genomic-Agent-Discovery](https://github.com/HelixGenomics/Genomic-Agent-Discovery) [![Genomic-Agent-Discovery MCP server](https://glama.ai/mcp/servers/HelixGenomics/Genomic-Agent-Discovery/badges/score.svg)](https://glama.ai/mcp/servers/HelixGenomics/Genomic-Agent-Discovery) 📇 🏠 - Multi-agent MCP server for genomic analysis — specialized AI agents analyze raw DNA files across 16 databases (ClinVar, GWAS, gnomAD, CPIC, AlphaMissense, and more) and coordinate findings through shared MCP tools. Privacy-first, runs locally. - [hlydecker/ucsc-genome-mcp](https://github.com/hlydecker/ucsc-genome-mcp) 🐍 ☁️ - MCP server to interact with the UCSC Genome Browser API, letting you find genomes, chromosomes, and more. - [JamesANZ/medical-mcp](https://github.com/JamesANZ/medical-mcp) 📇 🏠 - An MCP server that provides access to medical information, drug databases, and healthcare resources. Enables AI assistants to query medical data, drug interactions, and clinical guidelines.